Typecode to class map
Schema class definitions include structured patterns that constrain the format of their id
values. One element of the structured pattern is the typecode. The following table—which was derived from the schema—shows which schema class can have a given string in the typecode portion of its id
values, and which collections can contain instances of that schema class.
Typecode(s) | Schema class | Collection name(s) |
---|---|---|
bsm |
Biosample | biosample_set |
calib |
CalibrationInformation | calibration_set |
chcpr |
ChemicalConversionProcess | material_processing_set |
chrcon |
ChromatographyConfiguration | configuration_set |
clsite |
CollectingBiosamplesFromSite | collecting_biosamples_from_site_set |
cspro |
ChromatographicSeparationProcess | material_processing_set |
dgms , omprc |
MassSpectrometry | data_generation_set |
dgns , omprc |
NucleotideSequencing | data_generation_set |
dispro |
DissolvingProcess | material_processing_set |
dobj |
DataObject | data_object_set |
extrp |
Extraction | material_processing_set |
filtpr |
FiltrationProcess | material_processing_set |
frsite |
FieldResearchSite | field_research_site_set |
inst |
Instrument | instrument_set |
libprp |
LibraryPreparation | material_processing_set |
manif |
Manifest | manifest_set |
mixpro |
MixingProcess | material_processing_set |
mscon |
MassSpectrometryConfiguration | configuration_set |
pex |
ProtocolExecution | protocol_execution_set |
poolp |
Pooling | material_processing_set |
procsm |
ProcessedSample | processed_sample_set |
storpr |
StorageProcess | storage_process_set |
sty |
Study | study_set |
subspr |
SubSamplingProcess | material_processing_set |
wfmag |
MagsAnalysis | workflow_execution_set |
wfmb |
MetabolomicsAnalysis | workflow_execution_set |
wfmgan |
MetagenomeAnnotation | workflow_execution_set |
wfmgas |
MetagenomeAssembly | workflow_execution_set |
wfmp |
MetaproteomicsAnalysis | workflow_execution_set |
wfmsa |
MetagenomeSequencing | workflow_execution_set |
wfmtan |
MetatranscriptomeAnnotation | workflow_execution_set |
wfmtas |
MetatranscriptomeAssembly | workflow_execution_set |
wfmtex |
MetatranscriptomeExpressionAnalysis | workflow_execution_set |
wfnom |
NomAnalysis | workflow_execution_set |
wfrbt |
ReadBasedTaxonomyAnalysis | workflow_execution_set |
wfrqc |
ReadQcAnalysis | workflow_execution_set |