Slot: has_output
An output biosample to a processing step
URI: nmdc:has_output
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| BiosampleProcessing | A process that takes one or more biosamples as inputs and generates one or mo... | no |
| ReadBasedTaxonomyAnalysisActivity | A workflow execution activity that performs taxonomy classification using seq... | no |
| MetagenomeAnnotationActivity | A workflow execution activity that provides functional and structural annotat... | no |
| MetagenomeSequencingActivity | Initial sequencing activity that precedes any analysis | no |
| LibraryPreparation | yes | |
| CollectingBiosamplesFromSite | yes | |
| MetatranscriptomeAnnotationActivity | no | |
| WorkflowExecutionActivity | Represents an instance of an execution of a particular workflow | no |
| MagsAnalysisActivity | A workflow execution activity that uses computational binning tools to group ... | no |
| MetatranscriptomeActivity | A metatranscriptome activity that e | no |
| NomAnalysisActivity | no | |
| OmicsProcessing | The methods and processes used to generate omics data from a biosample or org... | yes |
| PlannedProcess | no | |
| MetagenomeAssembly | A workflow execution activity that converts sequencing reads into an assemble... | no |
| MetaproteomicsAnalysisActivity | no | |
| MetatranscriptomeAssembly | no | |
| FiltrationProcess | The process of segregation of phases; e | no |
| ChromatographicSeparationProcess | The process of using a selective partitioning of the analyte or interferent b... | no |
| MetabolomicsAnalysisActivity | no | |
| Pooling | physical combination of several instances of like material | yes |
| Extraction | A material separation in which a desired component of an input material is se... | yes |
| ReadQcAnalysisActivity | A workflow execution activity that performs quality control on raw Illumina r... | no |
| SubSamplingProcess | Separating a sample aliquot from the starting material for downstream activit... | yes |
| MixingProcess | The combining of components, particles or layers into a more homogeneous stat... | yes |
Properties
-
Range: NamedThing
-
Multivalued: True
Aliases
- output
Identifier and Mapping Information
Schema Source
- from schema: https://w3id.org/nmdc/nmdc
LinkML Source
name: has_output
description: An output biosample to a processing step
from_schema: https://w3id.org/nmdc/nmdc
aliases:
- output
rank: 1000
domain: NamedThing
multivalued: true
alias: has_output
domain_of:
- OmicsProcessing
- PlannedProcess
- WorkflowExecutionActivity
range: NamedThing