Slot: sample_collection_site
Free-text description of the place where the sample was collected — the geographic / environmental site or named location.
URI: nmdc:sample_collection_site
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| Biosample | Biological source material which can be characterized by an experiment | no |
| OrganismSample | A material sample in which all cells are expected to share the same genome | no |
Properties
- Range: String
Comments
- On
OrganismSample, this slot routes the collection-site half of JGI Isolate (NA) v19 form field 45 ("Collection Site or Growth Conditions"). The growth-conditions half routes tosample_growth_conditions. The submitter populates one or the other depending on whether the sample came from a field collection or from in-vitro maintenance.
Identifier and Mapping Information
Schema Source
- from schema: https://w3id.org/nmdc/nmdc
Mappings
| Mapping Type | Mapped Value |
|---|---|
LinkML Source
name: sample_collection_site
description: Free-text description of the place where the sample was collected — the
geographic / environmental site or named location.
comments:
- On `OrganismSample`, this slot routes the collection-site half of JGI Isolate (NA)
v19 form field 45 ("Collection Site or Growth Conditions"). The growth-conditions
half routes to `sample_growth_conditions`. The submitter populates one or the other
depending on whether the sample came from a field collection or from in-vitro maintenance.
from_schema: https://w3id.org/nmdc/nmdc
structured_aliases:
- literal_form: Collection Site or Growth Conditions
predicate: NARROW_SYNONYM
contexts:
- https://jgi.doe.gov/isolate-submission-form/v19
rank: 1000
alias: sample_collection_site
domain_of:
- Biosample
- OrganismSample
range: string