Subset: JgiIsolate
Slots originating from the JGI Isolate (NA) v19 submission form that are not already captured by MIxS or other existing standards. These slots support organism identity, strain verification, purity assessment, and biosafety classification for cultured isolate submissions to JGI.
URI: JgiIsolate
Comments
- Slots in this subset carry structured_aliases with context https://jgi.doe.gov/isolate-submission-form/v19 mapping to the exact field name on the JGI Isolate (NA) v19 spreadsheet.
See Also
Identifier and Mapping Information
Schema Source
- from schema: https://w3id.org/nmdc/nmdc
Slots in subset
| Slot | Description |
|---|---|
| gc_content | Estimated GC content as a percentage |
| host_genus | Genus of the host organism that the sample was collected from |
| host_species | Species of the host organism that the sample was collected from |
| host_strain | Strain of the host organism that the sample was collected from |
| isolate_name | Isolate or mutant name |
| organism_genus | Genus of the organism |
| organism_species | Species of the organism |
| sample_growth_conditions | Free-text description of the in-vitro conditions under which the organism sam... |
| sample_isolated_from | Free-text description of the environmental or biological matrix from which th... |
| sample_isolation_method | Method, protocol, or kit used to extract DNA/RNA from the sample |
| strain_name | Strain or cultivar name of the organism |